A day of field guides at #UCDavis and @Wired

Well, how perfect is this.  Today Wired ran a follow up "Birds, Poop and Roadkill: A field guide to Field Guides" to an article that came out last week about my drive for a full field guide to the microbes.  Last weeks article was "Book of Germs: The Quest for a Field Guide to Microbes."  It is by Daniela Hernandez and was a follow up on my talk at AAAS on "A Field Guide to the Microbes" which you can see on YouTube here.  I wrote a blog post with more detail on my obsession with field guides and microbes here.

While Daniela was writing the article I told her about how I collected field guides.  And I sent her a link to a private album I had made of me and my field guides which I am now making public:




For the follow up Daniela and a photographer from Wired Jon Snyder came to my office and lab and took some pictures of me and my field guides (with assistance from Russell Neches in my lab to help set up some of the "scenes).

Here are some pics from their visit.

And now today, the Wired article came out and and amazing coincidence happened.  I was taking a walk around campus with Misha Angrist who is giving a talk at UC Davis today.  And on the walk first we saw a collection of turkeys wandering around campus:

So my birding sense was turned up.  And then we walked across to the UC Davis Arboretum along Putah Creek and bumped into a "birding tour" of the Arboretum.  In six years here I have never seen one of these.  There were some teachers and kids carrying around field guides looking for particular species of birds.

And I note - one even had a field guide I do not have - the "Birds of Northern California" which I will be getting very very soon.  I think today will only serve to boost my obsession with field guides, but that is OK by me.

I note - I love the Wired photo spread of my field guides and my lab.  I particularly am happy that they includes some of the funnier field guides out there like "Flattened Fauna." And I am glad they got in Betsy Dyer's Field Guide to Bacteria because it is one of my favorite field guides of all time.  Thanks to Russell Neches for helping out with it and Daniela Hernandez and Jon Snyder for their work.

My obsession with a Field Guide for Microbes

Recently I gave a talk at the AAAS Meeting in Vancouver on my dream of having "A Field Guide to the Microbes".  The talk was part of a session on the "Earth Microbiome Project" organized by Jack Gilbert and others.

You can see a slideshow with audio of my talk below:

It seems that my talk has sparked a lot of interest as I have been interviewed by various people and publications about this concept.

For example, Holly Menninger recently interviewed me for a blog post for the "Your Wild Life" blog:
Is a Field Guide for Microbes in Our Future? Q & A with Microbiologist Jonathan Eisen.

And today a wonderfully illustrated piece came out at Wired.Com by Daniela Hernandez titled "Book of Germs: A Quest for a Field Guide to Microbes."

If you are interested in some more background on what I have been thinking about a Field Guide to the Microbes here are some previous things I have written or said or commented on relating to this topic:

• Editorial I wrote in 2009 w/ Catrionna MacCallum for a collection of articles in PLoS Journals on the Genomics of Emerging Infectious Diseases: PLoS Biology: Genomics of Emerging Infectious Disease: A PLoS .  It has a box on a Field Guide to the Microbes. 
• Microbe Magazine Article interviewing me: Genomic Analyses Could Lead to “Field Guide to Microbes”
• Press release from project in 2005: Poison + water = hydrogen. New microbial genome shows how
• Talk I gave in November 2011 at the Compass Summit on 'The Dark Matter of Biology." 

And if you want to check out some "Field Guide" like books on the topic of microbes I am posting some recommendations on an Amazon Page. My favorite is "A Field Guide to Bacteria" by Betsey Dyer.  

Slideshow w/ audio of my talk on "A Field Guide to the Microbes" from the AAAS Meeting #AAASMtg

I recorded the audio of my talk on "Towards a field guide to the microbes" from the AAAS meeting on Saturday AM. Here is a slideshow of the talk with audio synched to the slides (I did this using Keynote on a Mac with the "record Slideshow" function).





My slides from the talk are available at Slideshare.

Video of my talk from the Compass 2011 meeting in LA on a "Field Guide to Microbes"

My talk from the Compass Summit on the "Dark Matter of Biology"
The Dark Matter of Biology from Compass Summit on FORA.tv